黃咏洁博士 – 生物醫學學院

黃咏洁博士

Lecturer

huang2015@cuhk.edu.hk

簡介

Dr. Jessie HUANG (黃咏洁) received her PhD degree in Bioinformatics at the University of Georgia, U.S.A. and her Master’s Degree in Electrical Engineering at the University of South Carolina, U.S.A. She has joined the MSc program in Genomics and Bioinformatics as a lecturer since 2017.

Teaching and Research Interests

Genomics and bioinformatics
Microbial evolutionary genomics

Selected Publications

Wang, X., Zhang, Y., Ren, M., Xia, T., Chu, X., Liu, C., Lin. X., Huang, Y., Chen, Z., Yan, A., Luo, H. (2020). Cryptic speciation of a pelagic Roseobacter population varying at a few thousand nucleotide sites. The ISME Journal. doi:10.1038/s41396-020-00743-7
Xue, C. X., Zhang, H., Lin, H. Y., Sun, Y., Luo, D., Huang, Y., Zhang, X., Luo, H. (2020). Ancestral niche separation and evolutionary rate differentiation between sister marine flavobacteria lineages. Environmental Microbiology, 22(8), 3234-3247.
Zhang, H., Yoshizawa, S., Sun, Y., Huang, Y., Chu, X., González, J. M., Pinhassi, J. , Luo, H. (2019). Repeated evolutionary transitions of flavobacteria from marine to non-marine habitats. Environmental Microbiology, 21(2), 648-666.
Ren, M., Feng, X., Huang, Y., Wang, H., Hu, Z., Clingenpeel, S., Swan, B. K., Fonseca, M. M., Posada, D., Stepanauskas, R., Hollibaugh, J.T., Foster, P. G., Woyke, T., Luo, H. (2019). Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution. The ISME Journal, 13(9), 2150-2161.
Hellweger, F. L., Huang, Y., & Luo, H. (2018). Carbon limitation drives GC content evolution of a marine bacterium in an individual-based genome-scale model. The ISME Journal, 12(5), 1180-1187.
Luo, H.^, Huang, Y.^, Stepanauskas, R., & Tang, J. (2017). Excess of non-conservative amino acid changes in marine bacterioplankton lineages with reduced genomes. Nature Microbiology, 2(8), 17091. (^co-first author)
Li, X., Huang, Y., & Whitman, W. B. (2015). The relationship of the whole genome sequence identity to DNA hybridization varies between genera of prokaryotes. Antonie van Leeuwenhoek, 107(1), 241-249.
Huang, Y., & Mrázek, J. (2014). Assessing diversity of DNA structure-related sequence features in prokaryotic genomes. DNA Research, 21(3), 285-297.